Database Statistics
Last updated: 06/23/2009
| Infections | 14,192 |
| Transmissions | 14,188 |
| Incidents | 26,031 |
| Bacteria | 367 |
| Virus | 10,991 |
| Toxins | 21 |
The following table describes the number of Pathogen/Host/Disease combinations manually curated for the listed bacterial and viral NIAID Category A-C pathogens.
Click on a pathogen name for Metadata Statistics.
| Bacterial Pathogens | Category | Infections | Incidents |
| Bacteria | N/A | 1,874 | 10,322 |
| Bacillus anthracis | A | 68 | 215 |
| Clostridium botulinum | A | 74 | 1,208 |
| Francisella | A | 37 | 22 |
| Yersinia pestis | A | 32 | 47 |
| Brucella abortus | B | 29 | 34 |
| Brucella canis | B | 7 | 19 |
| Brucella melitensis | B | 40 | 77 |
| Brucella sp. | B | 13 | 331 |
| Brucella suis | B | 18 | 5 |
| Burkholderia mallei | B | 48 | 24 |
| Burkholderia pseudomallei | B | 206 | 157 |
| Campylobacter jejuni | B | 41 | 183 |
| Chlamydophila psittaci | B | 33 | 59 |
| Clostridium perfringens | B | 110 | 31 |
| Coxiella burnetii | B | 63 | 87 |
| Escherichia coli | B | 125 | 979 |
| Listeria monocytogenes | B | 90 | 128 |
| Salmonella | B | 403 | 1,848 |
| Shigella | B | 71 | 2,340 |
| Staphylococcus aureus | B | 114 | 98 |
| Vibrio cholerae | B | 30 | 240 |
| Yersinia enterocolitica | B | 85 | 146 |
| Rickettsiales | B | 67 | 220 |
| Mycobacterium tuberculosis | B*/C | 70 | 1,824 |
| Viral Pathogens | Category | Infections | Incidents |
| Viruses | N/A | 12,295 | 15,701 |
| Dengue virus group | A | 29 | 0 |
| Ebola-like viruses | A | 44 | 77 |
| Guanarito virus | A | 14 | 48 |
| Hantavirus | A | 76 | 82 |
| Junin virus | A | 12 | 60 |
| Lassa virus | A | 27 | 93 |
| Lymphocytic choriomeningitis virus | A | 118 | 32 |
| Machupo virus | A | 18 | 26 |
| Marburgvirus | A | 17 | 36 |
| Rift Valley fever virus | A | 35 | 99 |
| Variola virus | A | 50 | 106 |
| Eastern equine encephalitis virus | B | 84 | 186 |
| California encephalitis virus | B | 127 | 476 |
| Japanese encephalitis virus | B | 67 | 87 |
| Kyasanur forest disease virus | B | 33 | 46 |
| VEEV complex | B | 30 | 227 |
| West Nile virus | B | 335 | 1,395 |
| Western equine encephalomyelitis virus | B | 57 | 228 |
| Crimean-Congo hemorrhagic fever virus | C | 93 | 98 |
| Orthomyxoviridae | C | 10,794 | 11,917 |
| Henipavirus | C | 33 | 44 |
| SARS coronavirus | C | 202 | 338 |
The following table lists the number of terms in each of the ontologies and controlled vocabularies used to describe the infection systems in Gemina.
| Controlled Vocabulary | Terms |
| Location | 188,144 |
| Pathogen Taxonomy | 11,492 |
| Disease Ontology | 1,789 |
| Anatomy Ontology | 1,351 |
| Environmental Sources Ontology | 1,234 |
| Host Taxonomy | 1,156 |
| Symptoms Ontology | 827 |
| Reservoir Ontology | 339 |
| Toxin Ontology | 99 |
| Transmission Methods Ontology | 25 |
| Total | 206,456 |